Repositories list

• intermine-ws-python

  Public
  InterMine Client library in Python

  pythonbioinformaticsgenomics

  pythonbioinformaticsgenomics

  Python

  •

  BSD 2-Clause "Simplified" License

  •3535 forks•88 stars•1212 issues•44 pull requests•Updated Apr 21, 2026Apr 21, 2026

• intermine

  Public
  A powerful open source data warehouse system

  pythonjavaapi+ 17

  pythonjavaapiopen-sourceclojureopensourcebioinformaticsgenomicsgeneticsclojurescript+ 10

  Java

  •

  Other

  •348348 forks•270270 stars•218218 issues•33 pull requests•Updated Mar 16, 2026Mar 16, 2026

• biohackathon-25-sparql-services

  Public
  Hacking towards services for BlueGenes on top of QLever

  TypeScript

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 20, 2025Sep 20, 2025

• bluegenes

  Public
  A friendly next-generation interface for Genomic data discovery powered by InterMine

  clojuregenomicsclojurescript+ 2

  clojuregenomicsclojurescriptcljsintermine

  Clojure

  •

  Other

  •5959 forks•7676 stars•142142 issues•33 pull requests•Updated Jan 26, 2025Jan 26, 2025

• humanmine-bio-sources

  Public
  Data sources for HumanMine

  Java

  •33 forks•11 star•22 issues•22 pull requests•Updated Oct 12, 2024Oct 12, 2024

• docker-intermine-gradle

  Public
  Docker for InterMine

  Shell

  •

  GNU Lesser General Public License v2.1

  •1919 forks•55 stars•66 issues•22 pull requests•Updated Mar 24, 2024Mar 24, 2024

• im-tables-3

  Public
  clojurescript library to display and manipulate intermine query results on a webpage

  intermine

  intermine

  Clojure

  •

  GNU Lesser General Public License v2.1

  •55 forks•55 stars•1717 issues•99 pull requests•Updated Jul 9, 2023Jul 9, 2023

• intermine-scripts

  Public
  All scripts that used to be in the main intermine repository in bio/scripts and intermine/scripts

  PLpgSQL

  •

  GNU Lesser General Public License v2.1

  •1010 forks•22 stars•55 issues•11 pull request•Updated Mar 13, 2023Mar 13, 2023

• intermine_cloud

  Public
  repo for cloud infrastructure

  Python

  •

  GNU Lesser General Public License v2.1

  •11 fork•33 stars•00 issues•3737 pull requests•Updated Mar 6, 2023Mar 6, 2023

• im-docs

  Public
  Documentation for the InterMine project

  JavaScript

  •

  MIT License

  •2828 forks•66 stars•11 issue•3131 pull requests•Updated Mar 5, 2023Mar 5, 2023

• sequence-alignment-service

  Public
  Small sequence alignment service to be used in combination with the Multiple Sequence Alignment viewer

  JavaScript

  •22 forks•00 stars•00 issues•33 pull requests•Updated Mar 3, 2023Mar 3, 2023

• intermine-user-docs

  Public
  Documentation for using an InterMine webapp.

  JavaScript

  •

  GNU Lesser General Public License v3.0

  •88 forks•33 stars•00 issues•2222 pull requests•Updated Jan 27, 2023Jan 27, 2023

• bluegenes-tool-test

  Public
  STOP! THIS TOOL IS FOR BLUEGENES INTERNAL DEVELOPER USE.

  JavaScript

  •

  MIT License

  •00 forks•00 stars•00 issues•1212 pull requests•Updated Jan 7, 2023Jan 7, 2023

• bluegenes-tool-homology

  Public
  JavaScript

  •

  MIT License

  •22 forks•22 stars•00 issues•1313 pull requests•Updated Jan 7, 2023Jan 7, 2023

• bluegenes-protein-tissue-localisation

  Public
  bluegenes-tool

  bluegenes-tool

  JavaScript

  •

  MIT License

  •22 forks•00 stars•11 issue•1414 pull requests•Updated Jan 6, 2023Jan 6, 2023

• bluegenes-human-tissue-expression-visualizer

  Public
  bluegenes-tool

  bluegenes-tool

  JavaScript

  •

  MIT License

  •22 forks•00 stars•11 issue•1414 pull requests•Updated Jan 6, 2023Jan 6, 2023

• generator-bluegenes-tool

  Public
  Scaffold generator for BlueGenes tools

  JavaScript

  •

  MIT License

  •88 forks•55 stars•33 issues•1010 pull requests•Updated Jan 6, 2023Jan 6, 2023

• bluegenes-interaction-network

  Public
  bluegenes-tool

  bluegenes-tool

  JavaScript

  •

  MIT License

  •11 fork•00 stars•77 issues•2121 pull requests•Updated Jan 6, 2023Jan 6, 2023

• bluegenes-pathway-visualizer

  Public
  bluegenes-tool

  bluegenes-tool

  JavaScript

  •

  MIT License

  •11 fork•00 stars•55 issues•2121 pull requests•Updated Jan 6, 2023Jan 6, 2023

• bluegenes-go-concept-relation

  Public
  bluegenes-tool

  bluegenes-tool

  JavaScript

  •

  MIT License

  •55 forks•00 stars•77 issues•2121 pull requests•Updated Jan 5, 2023Jan 5, 2023

• identifiers-widget

  Public
  embeddable js widget to display identifiers.org info on your page

  JavaScript

  •

  Other

  •11 fork•11 star•33 issues•1717 pull requests•Updated Jan 5, 2023Jan 5, 2023

• im-tables

  Public
  Dynamic Result Table Library

  CoffeeScript

  •

  Other

  •2626 forks•1010 stars•3535 issues•2525 pull requests•Updated Dec 30, 2022Dec 30, 2022

• imjs

  Public
  InterMine Generic WebService Client Library

  JavaScript

  •

  Other

  •1111 forks•88 stars•1212 issues•1515 pull requests•Updated Dec 30, 2022Dec 30, 2022

• cross-repo-contributor-list

  Public
  JavaScript

  •

  MIT License

  •11 fork•11 star•00 issues•55 pull requests•Updated Dec 11, 2022Dec 11, 2022

• intermine-ws-java

  Public
  Java client for InterMine

  javabioinformatics

  javabioinformatics

  Java

  •11 fork•22 stars•22 issues•11 pull request•Updated Dec 7, 2022Dec 7, 2022

• bluegenes-tool-cytoscape

  Public
  Thin wrapper around the cytoscape-intermine library to present intermine gene & protein interaction networks in bluegenes

  bluegenes-tool

  bluegenes-tool

  HTML

  •

  Other

  •00 forks•11 star•11 issue•77 pull requests•Updated Dec 2, 2022Dec 2, 2022

• internships

  Public
  InterMine GSoC informational mini-site for gsoc mentors and students

  HTML

  •

  Apache License 2.0

  •1212 forks•1212 stars•22 issues•11 pull request•Updated Oct 5, 2022Oct 5, 2022

• biotestmine

  Public
  An example InterMine - for demoing and testing

  Shell

  •2020 forks•55 stars•33 issues•00 pull requests•Updated Aug 31, 2022Aug 31, 2022

• flymine

  Public
  FlyMine - an InterMine instance with Drosophila data

  Java

  •33 forks•11 star•22 issues•00 pull requests•Updated Aug 26, 2022Aug 26, 2022

• camCHILDMine

  Public
  Java

  •11 fork•11 star•00 issues•11 pull request•Updated Aug 16, 2022Aug 16, 2022